STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL88603.1Ureidoglycolate hydrolase. (160 aa)    
Predicted Functional Partners:
EFL89273.1
Putative allantoin catabolism protein; Identified by match to protein family HMM PF05899; match to protein family HMM PF07883; match to protein family HMM TIGR03214.
 
  
  0.983
EFL89272.1
Uricase; Identified by match to protein family HMM PF01522; match to protein family HMM PF09349; match to protein family HMM TIGR03164; match to protein family HMM TIGR03212.
 
 
  0.901
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
  
 0.878
EFL89280.1
Serine--glyoxylate aminotransferase; Identified by match to protein family HMM PF00266.
  
  
  0.876
ureA
Urease, gamma subunit; Identified by match to protein family HMM PF00547; match to protein family HMM TIGR00193; Belongs to the urease gamma subunit family.
    
  0.852
ureC
Urease, alpha subunit; Identified by match to protein family HMM PF00449; match to protein family HMM PF01979; match to protein family HMM TIGR01792.
    
  0.851
ureB
Urease, beta subunit; Identified by match to protein family HMM PF00699; match to protein family HMM TIGR00192; Belongs to the urease beta subunit family.
    
  0.851
EFL89269.1
Identified by match to protein family HMM PF06181.
 
    0.839
EFL88507.1
Isocitrate lyase; Identified by match to protein family HMM PF00463.
  
  
  0.836
EFL88602.1
Reductive dehalogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM TIGR02486.
       0.773
Your Current Organism:
Ahrensia sp. R2A130
NCBI taxonomy Id: 744979
Other names: A. sp. R2A130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.