STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ispZIntracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (214 aa)    
Predicted Functional Partners:
EFO32647.1
Conserved hypothetical protein.
 
     0.611
EFO31701.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06627.
  
     0.583
EFO33396.1
Putative signal peptide protein.
 
     0.480
EFO33185.1
Pyrimidine 5'-nucleotidase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01993.
 
     0.480
EFO32406.1
acetoacetyl-CoA reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR01829.
       0.473
secB
Protein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.440
EFO30683.1
HpcH/HpaI aldolase; Identified by match to protein family HMM PF07345.
  
     0.414
Your Current Organism:
Roseibium sp. TrichSKD4
NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.