STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFO32478.1Alpha-lactalbumin B/C. (88 aa)    
Predicted Functional Partners:
EFO32479.1
Putative phage-related DNA-binding protein.
       0.762
EFO32480.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.762
EFO32481.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.746
EFO32473.1
Putative phage regluatory protein; Identified by match to protein family HMM PF06252.
       0.682
EFO32474.1
Conserved hypothetical protein.
       0.682
EFO32475.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.682
EFO32476.1
Metal dependent phosphohydrolase.
       0.682
EFO32477.1
Conserved hypothetical protein.
       0.682
EFO32472.1
Putative gp36.
       0.659
EFO32469.1
Regulatory protein, LacI.
       0.637
Your Current Organism:
Roseibium sp. TrichSKD4
NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.