EFO32617.1 protein (Roseibium sp. TrichSKD4)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

EFO32617.1

Gene transfer agent. (140 aa)

Predicted Functional Partners:

EFO32615.1

0.986

EFO32618.1

0.986

EFO32613.1

0.934

EFO32611.1

0.865

EFO32609.1

0.862

EFO32616.1

0.790

EFO32619.1

0.790

EFO32614.1

0.773

EFO32612.1

0.725

EFO32626.1

0.647

Your Current Organism:

Roseibium sp. TrichSKD4

NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFO32609.1	EFO32611.1	TRICHSKD4_2411	TRICHSKD4_2413	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	0.998
EFO32609.1	EFO32612.1	TRICHSKD4_2411	TRICHSKD4_2414	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Conserved hypothetical protein.	0.584
EFO32609.1	EFO32613.1	TRICHSKD4_2411	TRICHSKD4_2415	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Phage protein DNA packaging protein; Identified by match to protein family HMM TIGR02215.	0.993
EFO32609.1	EFO32614.1	TRICHSKD4_2411	TRICHSKD4_2416	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Hypothetical protein; Identified by Glimmer3; putative.	0.517
EFO32609.1	EFO32615.1	TRICHSKD4_2411	TRICHSKD4_2417	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Putative phage head-tail adaptor; Identified by match to protein family HMM TIGR01563.	0.866
EFO32609.1	EFO32616.1	TRICHSKD4_2411	TRICHSKD4_2418	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Phage protein, HK97 gp10 family; Identified by match to protein family HMM PF07772; match to protein family HMM TIGR01725.	0.559
EFO32609.1	EFO32617.1	TRICHSKD4_2411	TRICHSKD4_2419	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Gene transfer agent.	0.862
EFO32609.1	EFO32618.1	TRICHSKD4_2411	TRICHSKD4_2420	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Conserved hypothetical protein.	0.868
EFO32609.1	EFO32619.1	TRICHSKD4_2411	TRICHSKD4_2421	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Hypothetical protein.	0.553
EFO32609.1	EFO32626.1	TRICHSKD4_2411	TRICHSKD4_2428	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	Hypothetical protein; Identified by Glimmer3; putative.	0.600
EFO32611.1	EFO32609.1	TRICHSKD4_2413	TRICHSKD4_2411	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	0.998
EFO32611.1	EFO32612.1	TRICHSKD4_2413	TRICHSKD4_2414	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Conserved hypothetical protein.	0.594
EFO32611.1	EFO32613.1	TRICHSKD4_2413	TRICHSKD4_2415	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Phage protein DNA packaging protein; Identified by match to protein family HMM TIGR02215.	0.972
EFO32611.1	EFO32614.1	TRICHSKD4_2413	TRICHSKD4_2416	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Hypothetical protein; Identified by Glimmer3; putative.	0.527
EFO32611.1	EFO32615.1	TRICHSKD4_2413	TRICHSKD4_2417	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Putative phage head-tail adaptor; Identified by match to protein family HMM TIGR01563.	0.911
EFO32611.1	EFO32616.1	TRICHSKD4_2413	TRICHSKD4_2418	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Phage protein, HK97 gp10 family; Identified by match to protein family HMM PF07772; match to protein family HMM TIGR01725.	0.574
EFO32611.1	EFO32617.1	TRICHSKD4_2413	TRICHSKD4_2419	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Gene transfer agent.	0.865
EFO32611.1	EFO32618.1	TRICHSKD4_2413	TRICHSKD4_2420	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Conserved hypothetical protein.	0.866
EFO32611.1	EFO32619.1	TRICHSKD4_2413	TRICHSKD4_2421	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Hypothetical protein.	0.563
EFO32611.1	EFO32626.1	TRICHSKD4_2413	TRICHSKD4_2428	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	Hypothetical protein; Identified by Glimmer3; putative.	0.604