STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFO30816.1Pe-pgrs family protein. (940 aa)    
Predicted Functional Partners:
EFO34067.1
Proprotein convertase P; Identified by match to protein family HMM PF00082; match to protein family HMM PF00353; match to protein family HMM PF01483; match to protein family HMM PF06594.
 
0.995
EFO28591.1
Putative outer membrane adhesin like protein.
  
 0.633
ftsK
DNA translocase FtsK; Identified by match to protein family HMM PF01580; match to protein family HMM PF09397.
    
 
 0.614
EFO33036.1
Endoglucanase; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.589
EFO28694.1
Outer membrane adhesin like protein; Identified by match to protein family HMM PF00353; match to protein family HMM PF05345.
  
  0.578
EFO29141.1
Hypothetical protein; Identified by Glimmer3; putative.
    
 
 0.533
EFO32959.1
Carboxy--processing protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A family.
   
   0.525
EFO34204.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082.
  
 0.521
EFO33880.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
 0.521
EFO33026.1
Acyl carrier protein.
   
 
 0.510
Your Current Organism:
Roseibium sp. TrichSKD4
NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.