EFO28899.1 protein (Roseibium sp. TrichSKD4)

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Score

EFO28899.1

Putative membrane protein; Overlaps another CDS with the same product name. (452 aa)

Predicted Functional Partners:

EFO28900.1

0.950

EFO31804.1

0.751

EFO31848.1

0.646

EFO32430.1

0.640

EFO29349.1

0.616

EFO31429.1

0.613

EFO30342.1

0.598

EFO34287.1

0.585

EFO28901.1

0.581

EFO28902.1

0.581

Your Current Organism:

Roseibium sp. TrichSKD4

NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFO28899.1	EFO28900.1	TRICHSKD4_4710	TRICHSKD4_4711	Putative membrane protein; Overlaps another CDS with the same product name.	Putative membrane protein; Overlaps another CDS with the same product name.	0.950
EFO28899.1	EFO28901.1	TRICHSKD4_4710	TRICHSKD4_4712	Putative membrane protein; Overlaps another CDS with the same product name.	Ribosomal RNA small subunit methyltransferase C; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily.	0.581
EFO28899.1	EFO28902.1	TRICHSKD4_4710	TRICHSKD4_4713	Putative membrane protein; Overlaps another CDS with the same product name.	Ribosomal small subunit pseudouridine synthase A; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.581
EFO28899.1	EFO29349.1	TRICHSKD4_4710	TRICHSKD4_5175	Putative membrane protein; Overlaps another CDS with the same product name.	Conserved hypothetical protein.	0.616
EFO28899.1	EFO30342.1	TRICHSKD4_4710	TRICHSKD4_3928	Putative membrane protein; Overlaps another CDS with the same product name.	LpsH.	0.598
EFO28899.1	EFO31429.1	TRICHSKD4_4710	TRICHSKD4_3119	Putative membrane protein; Overlaps another CDS with the same product name.	Conserved hypothetical protein.	0.613
EFO28899.1	EFO31804.1	TRICHSKD4_4710	TRICHSKD4_2894	Putative membrane protein; Overlaps another CDS with the same product name.	Conserved hypothetical protein.	0.751
EFO28899.1	EFO31848.1	TRICHSKD4_4710	TRICHSKD4_2938	Putative membrane protein; Overlaps another CDS with the same product name.	Conserved hypothetical protein.	0.646
EFO28899.1	EFO32430.1	TRICHSKD4_4710	TRICHSKD4_2229	Putative membrane protein; Overlaps another CDS with the same product name.	Identified by match to protein family HMM PF05170.	0.640
EFO28899.1	EFO34287.1	TRICHSKD4_4710	TRICHSKD4_0065	Putative membrane protein; Overlaps another CDS with the same product name.	Identified by match to protein family HMM PF01471; match to protein family HMM PF08238.	0.585
EFO28900.1	EFO28899.1	TRICHSKD4_4711	TRICHSKD4_4710	Putative membrane protein; Overlaps another CDS with the same product name.	Putative membrane protein; Overlaps another CDS with the same product name.	0.950
EFO28900.1	EFO28901.1	TRICHSKD4_4711	TRICHSKD4_4712	Putative membrane protein; Overlaps another CDS with the same product name.	Ribosomal RNA small subunit methyltransferase C; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily.	0.581
EFO28900.1	EFO28902.1	TRICHSKD4_4711	TRICHSKD4_4713	Putative membrane protein; Overlaps another CDS with the same product name.	Ribosomal small subunit pseudouridine synthase A; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.581
EFO28900.1	EFO30342.1	TRICHSKD4_4711	TRICHSKD4_3928	Putative membrane protein; Overlaps another CDS with the same product name.	LpsH.	0.561
EFO28900.1	EFO31429.1	TRICHSKD4_4711	TRICHSKD4_3119	Putative membrane protein; Overlaps another CDS with the same product name.	Conserved hypothetical protein.	0.533
EFO28900.1	EFO32430.1	TRICHSKD4_4711	TRICHSKD4_2229	Putative membrane protein; Overlaps another CDS with the same product name.	Identified by match to protein family HMM PF05170.	0.507
EFO28901.1	EFO28899.1	TRICHSKD4_4712	TRICHSKD4_4710	Ribosomal RNA small subunit methyltransferase C; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily.	Putative membrane protein; Overlaps another CDS with the same product name.	0.581
EFO28901.1	EFO28900.1	TRICHSKD4_4712	TRICHSKD4_4711	Ribosomal RNA small subunit methyltransferase C; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily.	Putative membrane protein; Overlaps another CDS with the same product name.	0.581
EFO28901.1	EFO28902.1	TRICHSKD4_4712	TRICHSKD4_4713	Ribosomal RNA small subunit methyltransferase C; Identified by match to protein family HMM PF05175; Belongs to the methyltransferase superfamily.	Ribosomal small subunit pseudouridine synthase A; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.950
EFO28902.1	EFO28899.1	TRICHSKD4_4713	TRICHSKD4_4710	Ribosomal small subunit pseudouridine synthase A; Identified by match to protein family HMM PF00849; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Putative membrane protein; Overlaps another CDS with the same product name.	0.581