STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFO29253.1AsnC family transcriptional regulator; Identified by match to protein family HMM PF01037. (164 aa)    
Predicted Functional Partners:
EFO29254.1
Identified by match to protein family HMM PF01571; Belongs to the GcvT family.
 
     0.658
EFO30507.1
Anthranilate synthase; Identified by match to protein family HMM PF00117; match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00566; match to protein family HMM TIGR01815.
   
 
  0.538
EFO31174.1
Siroheme synthase 1; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
  
 
 0.519
EFO28504.1
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
  
 
 0.519
EFO29252.1
Transposase IS4; Identified by match to protein family HMM PF01609.
       0.495
EFO33082.1
Para-aminobenzoate synthase, subunit I; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553.
     
 0.494
EFO34244.1
HTH-type transcriptional regulator Ptr1; Identified by match to protein family HMM PF01037.
  
     0.441
EFO33554.1
HTH-type transcriptional regulator Ptr1; Identified by match to protein family HMM PF01037.
  
     0.441
Your Current Organism:
Roseibium sp. TrichSKD4
NCBI taxonomy Id: 744980
Other names: R. sp. TrichSKD4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.