Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFO29805.1 | EFO29806.1 | TRICHSKD4_5641 | TRICHSKD4_5642 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.956 |
| EFO29805.1 | EFO29807.1 | TRICHSKD4_5641 | TRICHSKD4_5643 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.962 |
| EFO29805.1 | EFO29808.1 | TRICHSKD4_5641 | TRICHSKD4_5644 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | MarR family transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.964 |
| EFO29805.1 | EFO29809.1 | TRICHSKD4_5641 | TRICHSKD4_5645 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | Granaticin polyketide synthase putative ketoacyl reductase 1; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | 0.946 |
| EFO29805.1 | EFO29810.1 | TRICHSKD4_5641 | TRICHSKD4_5646 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | salicylyl-CoA 5-hydroxylase; Identified by match to protein family HMM PF00724; match to protein family HMM PF01494. | 0.997 |
| EFO29805.1 | EFO29811.1 | TRICHSKD4_5641 | TRICHSKD4_5647 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | Esterase/lipase/thioesterase. | 0.669 |
| EFO29805.1 | kynA | TRICHSKD4_5641 | TRICHSKD4_5640 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | Chain C, H55a Mutant Of Tryptophan 2,3-Dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.911 |
| EFO29805.1 | kynU | TRICHSKD4_5641 | TRICHSKD4_5639 | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.909 |
| EFO29806.1 | EFO29805.1 | TRICHSKD4_5642 | TRICHSKD4_5641 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | 0.956 |
| EFO29806.1 | EFO29807.1 | TRICHSKD4_5642 | TRICHSKD4_5643 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.985 |
| EFO29806.1 | EFO29808.1 | TRICHSKD4_5642 | TRICHSKD4_5644 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | MarR family transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.946 |
| EFO29806.1 | EFO29809.1 | TRICHSKD4_5642 | TRICHSKD4_5645 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Granaticin polyketide synthase putative ketoacyl reductase 1; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | 0.895 |
| EFO29806.1 | EFO29810.1 | TRICHSKD4_5642 | TRICHSKD4_5646 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | salicylyl-CoA 5-hydroxylase; Identified by match to protein family HMM PF00724; match to protein family HMM PF01494. | 0.960 |
| EFO29806.1 | EFO29811.1 | TRICHSKD4_5642 | TRICHSKD4_5647 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Esterase/lipase/thioesterase. | 0.606 |
| EFO29806.1 | kynA | TRICHSKD4_5642 | TRICHSKD4_5640 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Chain C, H55a Mutant Of Tryptophan 2,3-Dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.830 |
| EFO29806.1 | kynU | TRICHSKD4_5642 | TRICHSKD4_5639 | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.774 |
| EFO29807.1 | EFO29805.1 | TRICHSKD4_5643 | TRICHSKD4_5641 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | benzoate--CoA ligase; Identified by match to protein family HMM PF00501. | 0.962 |
| EFO29807.1 | EFO29806.1 | TRICHSKD4_5643 | TRICHSKD4_5642 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.985 |
| EFO29807.1 | EFO29808.1 | TRICHSKD4_5643 | TRICHSKD4_5644 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | MarR family transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.985 |
| EFO29807.1 | EFO29809.1 | TRICHSKD4_5643 | TRICHSKD4_5645 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. | Granaticin polyketide synthase putative ketoacyl reductase 1; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. | 0.928 |
page 1 of 5