Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFS48210.1PFAM: FAD dependent oxidoreductase. (432 aa)    
Predicted Functional Partners:
AFS48716.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 
  0.920
AFS48211.1
Glutamine synthetase-like protein,glutamine synthetase family protein; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain.
 
    0.897
AFS48834.1
Glycine cleavage system T-protein-like,folate-binding protein, aminomethyltransferase-like protein; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form; glycine cleavage system T protein; Belongs to the GcvT family.
  
 0.779
AFS49507.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form; Belongs to the GcvT family.
  
 0.779
AFS49259.1
Glutamine synthetase-like protein; PFAM: Glutamine synthetase, catalytic domain.
 
    0.695
AFS48371.1
PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.665
AFS48484.1
PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
    0.552
AFS48939.1
PFAM: Peptidase C26.
 
  
 0.457
Your Current Organism:
alpha proteobacterium HIMB59
NCBI taxonomy Id: 744985
Other names: a. proteobacterium HIMB59
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