STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ56991.1PFAM: Protein of unknown function (DUF3604). (669 aa)    
Predicted Functional Partners:
EHQ57613.1
Hypothetical protein.
 
     0.774
EHQ57612.1
Hypothetical protein.
 
     0.769
EHQ58351.1
Hypothetical protein.
  
     0.661
EHQ56968.1
Hypothetical protein.
  
     0.647
EHQ56973.1
Alkyl sulfatase-like hydrolase; PFAM: Metallo-beta-lactamase superfamily.
  
     0.544
EHQ56981.1
PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.533
EHQ57001.1
DNA-binding protein with HTH domain.
  
     0.521
EHQ56301.1
TIGRFAM: parallel beta-helix repeat-containing protein; parallel beta-helix repeat (two copies).
  
     0.506
EHQ57416.1
N-acyl-D-aspartate/D-glutamate deacylase; PFAM: Amidohydrolase family.
  
     0.492
EHQ56992.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
       0.476
Your Current Organism:
gamma proteobacterium HIMB55
NCBI taxonomy Id: 745014
Other names: g. proteobacterium HIMB55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.