STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
citDCitrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase. (96 aa)    
Predicted Functional Partners:
AEX51537.1
Citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.998
AEX51536.1
PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit.
 
 
 0.996
AEX51539.1
(citrate (pro-3S)-lyase) ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.989
AEX51535.1
holo-ACP synthase CitX; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase CitX.
 
  
 0.986
citG
triphosphoribosyl-dephospho-CoA synthase CitG; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG.
 
  
 0.976
mdcB
triphosphoribosyl-dephospho-CoA synthase MdcB; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.925
AEX51541.1
Na+/citrate symporter; PFAM: 2-hydroxycarboxylate transporter family.
 
   
 0.715
AEX51533.1
Putative esterase of the alpha/beta hydrolase fold protein; PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234).
       0.678
AEX50178.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
    0.649
AEX50203.1
PFAM: Phosphoribosyl-dephospho-CoA transferase MdcG; TIGRFAM: malonate decarboxylase holo-[acyl-carrier-protein] synthase.
  
  
 0.618
Your Current Organism:
Rahnella aquatilis
NCBI taxonomy Id: 745277
Other names: R. aquatilis CIP 78.65 = ATCC 33071, Rahnella aquatilis ATCC 33071, Rahnella aquatilis ATCC 33071 = CIP 78.65, Rahnella aquatilis CIP 78.65, Rahnella aquatilis CIP 78.65 = ATCC 33071, Rahnella aquatilis CUETM 77-115, Rahnella aquatilis CUETM 77-155, Rahnella aquatilis DSM 4594
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