Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGH49033.1 | AGH50439.1 | G432_06540 | G432_13605 | COG1403 Restriction endonuclease. | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | 0.554 |
AGH49033.1 | AGH50702.1 | G432_06540 | G432_14925 | COG1403 Restriction endonuclease. | COG3505 Type IV secretory pathway, VirD4 components. | 0.554 |
AGH49033.1 | AGH51408.1 | G432_06540 | G432_18450 | COG1403 Restriction endonuclease. | COG3505 Type IV secretory pathway, VirD4 components. | 0.554 |
AGH49033.1 | AGH51475.1 | G432_06540 | G432_18785 | COG1403 Restriction endonuclease. | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | 0.554 |
AGH50439.1 | AGH49033.1 | G432_13605 | G432_06540 | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | COG1403 Restriction endonuclease. | 0.554 |
AGH50439.1 | AGH51408.1 | G432_13605 | G432_18450 | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | COG3505 Type IV secretory pathway, VirD4 components. | 0.928 |
AGH50439.1 | AGH51475.1 | G432_13605 | G432_18785 | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | 0.901 |
AGH50702.1 | AGH49033.1 | G432_14925 | G432_06540 | COG3505 Type IV secretory pathway, VirD4 components. | COG1403 Restriction endonuclease. | 0.554 |
AGH51408.1 | AGH49033.1 | G432_18450 | G432_06540 | COG3505 Type IV secretory pathway, VirD4 components. | COG1403 Restriction endonuclease. | 0.554 |
AGH51408.1 | AGH50439.1 | G432_18450 | G432_13605 | COG3505 Type IV secretory pathway, VirD4 components. | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | 0.928 |
AGH51408.1 | AGH51475.1 | G432_18450 | G432_18785 | COG3505 Type IV secretory pathway, VirD4 components. | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | 0.928 |
AGH51475.1 | AGH49033.1 | G432_18785 | G432_06540 | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | COG1403 Restriction endonuclease. | 0.554 |
AGH51475.1 | AGH50439.1 | G432_18785 | G432_13605 | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | 0.901 |
AGH51475.1 | AGH51408.1 | G432_18785 | G432_18450 | Conjugal transfer coupling protein TraG; COG3505 Type IV secretory pathway, VirD4 components. | COG3505 Type IV secretory pathway, VirD4 components. | 0.928 |