STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH49119.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
AGH48090.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 
 0.565
AGH49118.1
PhzF family phenazine biosynthesis protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.
     
 0.546
AGH48897.1
COG2902 NAD-specific glutamate dehydrogenase.
 
    0.540
AGH49117.1
Putative transporter; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.539
AGH48809.1
COG1309 Transcriptional regulator.
  
    0.501
AGH48193.1
Hypothetical protein; COG0251 Putative translation initiation inhibitor, yjgF family.
 
     0.479
AGH50976.1
Regulatory protein TetR; COG1309 Transcriptional regulator.
  
    0.451
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
 
 0.427
AGH49116.1
COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
  
    0.411
AGH48561.1
Acetyltransferase-like protein; COG2388 Predicted acetyltransferase.
 
    0.400
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.