STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH49403.1COG4227 Antirestriction protein. (89 aa)    
Predicted Functional Partners:
AGH49408.1
COG4227 Antirestriction protein.
     0.915
AGH50203.1
COG4227 Antirestriction protein.
 
     0.834
AGH51521.1
COG4227 Antirestriction protein.
 
     0.816
AGH49404.1
N-terminus replication primase; COG4227 Antirestriction protein.
 
    
0.797
AGH50686.1
COG4227 Antirestriction protein.
 
     0.781
AGH50691.1
COG4227 Antirestriction protein.
  
     0.688
AGH49405.1
Phage integrase family protein.
       0.620
AGH49406.1
Hypothetical protein.
       0.620
AGH51408.1
COG3505 Type IV secretory pathway, VirD4 components.
 
    0.549
AGH49418.1
Hypothetical protein.
  
     0.510
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.