STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH49699.1EmrB/QacA family drug resistance transporter; COG0477 Permeases of the major facilitator superfamily. (517 aa)    
Predicted Functional Partners:
AGH49698.1
COG1566 Multidrug resistance efflux pump.
 
 
 0.984
AGH49700.1
COG1538 Outer membrane protein.
  
  
 0.898
AGH50547.1
COG1566 Multidrug resistance efflux pump.
 
 
 0.876
AGH48339.1
Secretion protein HlyD family protein; COG1566 Multidrug resistance efflux pump.
 
 
 0.875
AGH49697.1
COG1846 Transcriptional regulators.
     
 0.633
AGH50910.1
Secretion protein HlyD family protein; COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.584
AGH49701.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.441
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
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