Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGH50130.1 | AGH50131.1 | G432_12045 | G432_12050 | Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. | Hypothetical protein; COG0770 UDP-N-acetylmuramyl pentapeptide synthase. | 0.666 |
AGH50130.1 | AGH50132.1 | G432_12045 | G432_12055 | Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. | Hypothetical protein. | 0.655 |
AGH50130.1 | AGH50133.1 | G432_12045 | G432_12060 | Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | 0.544 |
AGH50131.1 | AGH50130.1 | G432_12050 | G432_12045 | Hypothetical protein; COG0770 UDP-N-acetylmuramyl pentapeptide synthase. | Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. | 0.666 |
AGH50131.1 | AGH50132.1 | G432_12050 | G432_12055 | Hypothetical protein; COG0770 UDP-N-acetylmuramyl pentapeptide synthase. | Hypothetical protein. | 0.933 |
AGH50131.1 | AGH50133.1 | G432_12050 | G432_12060 | Hypothetical protein; COG0770 UDP-N-acetylmuramyl pentapeptide synthase. | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | 0.632 |
AGH50132.1 | AGH50130.1 | G432_12055 | G432_12045 | Hypothetical protein. | Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. | 0.655 |
AGH50132.1 | AGH50131.1 | G432_12055 | G432_12050 | Hypothetical protein. | Hypothetical protein; COG0770 UDP-N-acetylmuramyl pentapeptide synthase. | 0.933 |
AGH50132.1 | AGH50133.1 | G432_12055 | G432_12060 | Hypothetical protein. | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | 0.814 |
AGH50133.1 | AGH50130.1 | G432_12060 | G432_12045 | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. | 0.544 |
AGH50133.1 | AGH50131.1 | G432_12060 | G432_12050 | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | Hypothetical protein; COG0770 UDP-N-acetylmuramyl pentapeptide synthase. | 0.632 |
AGH50133.1 | AGH50132.1 | G432_12060 | G432_12055 | Response regulator receiver protein; COG0784 FOG: CheY-like receiver. | Hypothetical protein. | 0.814 |