STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH50554.1COG1300 Uncharacterized membrane protein. (347 aa)    
Predicted Functional Partners:
AGH50553.1
RDD domain-containing protein; COG1714 Predicted membrane protein/domain.
 
    0.983
AGH50555.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.978
AGH50557.1
Hypothetical protein.
 
     0.973
AGH50558.1
Hypothetical protein.
 
     0.972
AGH50556.1
ATPase; COG0714 MoxR-like ATPases.
 
    0.963
AGH50559.1
Hypothetical protein.
       0.605
AGH49368.1
Hypothetical protein.
  
     0.475
AGH48012.1
TPR repeat-containing protein; COG4995 Uncharacterized protein conserved in bacteria.
  
     0.415
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.