Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGH48069.1 | AGH49741.1 | G432_01705 | G432_10090 | Colicin V production protein. | COG1466 DNA polymerase III, delta subunit. | 0.446 |
AGH48069.1 | AGH50632.1 | G432_01705 | G432_14565 | Colicin V production protein. | Hypothetical protein. | 0.646 |
AGH48069.1 | AGH51332.1 | G432_01705 | G432_18070 | Colicin V production protein. | Hypothetical protein. | 0.530 |
AGH48069.1 | lptD | G432_01705 | G432_02870 | Colicin V production protein. | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.576 |
AGH48258.1 | AGH49741.1 | G432_02655 | G432_10090 | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | COG1466 DNA polymerase III, delta subunit. | 0.498 |
AGH48258.1 | AGH50631.1 | G432_02655 | G432_14560 | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | Cell division protein. | 0.543 |
AGH48258.1 | AGH50632.1 | G432_02655 | G432_14565 | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | Hypothetical protein. | 0.713 |
AGH48258.1 | AGH51332.1 | G432_02655 | G432_18070 | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | Hypothetical protein. | 0.735 |
AGH48258.1 | ftsQ | G432_02655 | G432_05525 | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.551 |
AGH48258.1 | lptD | G432_02655 | G432_02870 | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.743 |
AGH49741.1 | AGH48069.1 | G432_10090 | G432_01705 | COG1466 DNA polymerase III, delta subunit. | Colicin V production protein. | 0.446 |
AGH49741.1 | AGH48258.1 | G432_10090 | G432_02655 | COG1466 DNA polymerase III, delta subunit. | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | 0.498 |
AGH49741.1 | AGH50632.1 | G432_10090 | G432_14565 | COG1466 DNA polymerase III, delta subunit. | Hypothetical protein. | 0.690 |
AGH49741.1 | AGH51332.1 | G432_10090 | G432_18070 | COG1466 DNA polymerase III, delta subunit. | Hypothetical protein. | 0.669 |
AGH49741.1 | ftsQ | G432_10090 | G432_05525 | COG1466 DNA polymerase III, delta subunit. | Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.481 |
AGH49741.1 | lptD | G432_10090 | G432_02870 | COG1466 DNA polymerase III, delta subunit. | Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.650 |
AGH50631.1 | AGH48258.1 | G432_14560 | G432_02655 | Cell division protein. | Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit. | 0.543 |
AGH50631.1 | AGH50632.1 | G432_14560 | G432_14565 | Cell division protein. | Hypothetical protein. | 0.932 |
AGH50631.1 | AGH50633.1 | G432_14560 | G432_14570 | Cell division protein. | COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.881 |
AGH50631.1 | AGH50634.1 | G432_14560 | G432_14575 | Cell division protein. | Hypothetical protein. | 0.741 |
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