STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH50670.1Copper resistance D domain-containing protein; COG1276 Putative copper export protein. (307 aa)    
Predicted Functional Partners:
AGH50671.1
Copper resistance protein; COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
 
  
 0.967
AGH47786.1
TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.586
AGH47946.1
Hypothetical protein.
  
     0.579
AGH50039.1
Hypothetical protein.
  
     0.576
AGH49012.1
TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.564
AGH47804.1
TonB-dependent receptor-like protein; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.540
AGH47794.1
General secretion pathway protein H; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.530
AGH49900.1
Hypothetical protein.
  
     0.524
AGH49464.1
Hypothetical protein; COG5455 Predicted integral membrane protein.
  
     0.522
AGH51431.1
Outer membrane chaperone Skp.
  
     0.517
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.