STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH50723.1COG4716 Myosin-crossreactive antigen. (654 aa)    
Predicted Functional Partners:
AGH50724.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
       0.506
AGH50725.1
Hypothetical protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
       0.506
AGH50722.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.418
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.