Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGH48148.1 | AGH50320.1 | G432_02100 | G432_13005 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0067 Glutamate synthase domain 1. | 0.746 |
| AGH48148.1 | argB | G432_02100 | G432_08240 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.975 |
| AGH48148.1 | argC | G432_02100 | G432_17455 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.963 |
| AGH48148.1 | argD | G432_02100 | G432_02105 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine transaminase protein; COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.993 |
| AGH48148.1 | argG | G432_02100 | G432_09580 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.997 |
| AGH48148.1 | argH | G432_02100 | G432_10550 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.973 |
| AGH48148.1 | argJ | G432_02100 | G432_16240 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.994 |
| AGH48148.1 | carB | G432_02100 | G432_00690 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family. | 0.990 |
| AGH50320.1 | AGH48148.1 | G432_13005 | G432_02100 | COG0067 Glutamate synthase domain 1. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.746 |
| AGH50320.1 | argB | G432_13005 | G432_08240 | COG0067 Glutamate synthase domain 1. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.761 |
| AGH50320.1 | argC | G432_13005 | G432_17455 | COG0067 Glutamate synthase domain 1. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.752 |
| AGH50320.1 | argD | G432_13005 | G432_02105 | COG0067 Glutamate synthase domain 1. | Acetylornithine transaminase protein; COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.761 |
| AGH50320.1 | argG | G432_13005 | G432_09580 | COG0067 Glutamate synthase domain 1. | COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.757 |
| AGH50320.1 | argH | G432_13005 | G432_10550 | COG0067 Glutamate synthase domain 1. | Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.761 |
| AGH50320.1 | argJ | G432_13005 | G432_16240 | COG0067 Glutamate synthase domain 1. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.540 |
| AGH50320.1 | carB | G432_13005 | G432_00690 | COG0067 Glutamate synthase domain 1. | COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family. | 0.984 |
| AGH51210.1 | AGH51211.1 | G432_17460 | G432_17465 | NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | Regulatory protein MarR; COG1846 Transcriptional regulators. | 0.889 |
| AGH51210.1 | argC | G432_17460 | G432_17455 | NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.889 |
| AGH51211.1 | AGH51210.1 | G432_17465 | G432_17460 | Regulatory protein MarR; COG1846 Transcriptional regulators. | NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). | 0.889 |
| AGH51211.1 | argC | G432_17465 | G432_17455 | Regulatory protein MarR; COG1846 Transcriptional regulators. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.889 |
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