STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGH51451.1Putative methylase/helicase; COG2813 16S RNA G1207 methylase RsmC. (1367 aa)    
Predicted Functional Partners:
AGH50210.1
Hypothetical protein.
 
     0.761
AGH50693.1
Hypothetical protein.
 
     0.761
AGH51510.1
COG3803 Uncharacterized protein conserved in bacteria.
 
     0.759
AGH50211.1
Hypothetical protein.
 
     0.758
AGH51507.1
Hypothetical protein.
  
     0.758
AGH50695.1
Hypothetical protein.
 
     0.757
AGH51511.1
Hypothetical protein.
 
     0.756
AGH51501.1
Hypothetical protein.
 
     0.751
AGH50694.1
Hypothetical protein.
 
     0.722
AGH51498.1
Hypothetical protein.
  
     0.698
Your Current Organism:
Sphingomonas sp. MM1
NCBI taxonomy Id: 745310
Other names: S. sp. MM-1, Sphingomonas sp. MM-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.