STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN4PDZ domain containing ring finger 4. (778 aa)    
Predicted Functional Partners:
BEX5
Brain expressed X-linked 5.
      
 0.799
BIRC6
Baculoviral IAP repeat-containing protein 6 (apollon).
   
 0.729
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.674
LONRF2
LON peptidase N-terminal domain and ring finger 2.
      
 0.622
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.600
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.575
STK32B
Serine/threonine kinase 32B.
    
 
 0.551
LRRC1
Leucine rich repeat containing 1.
    
 0.547
GABARAPL2
GABA type A receptor associated protein like 2.
   
 
 0.540
KCNJ6
Potassium inwardly-rectifying channel subfamily J member 6.
   
  
 0.539
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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