STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCP4L1Purkinje cell protein 4 like 1. (110 aa)    
Predicted Functional Partners:
TMEM192
Transmembrane protein 192.
   
 0.790
NIM1K
NIM1 serine/threonine protein kinase.
    
 
 0.784
BPIFB3
BPI fold containing family B member 3.
      
 0.765
PPP2R2B
Serine/threonine-protein phosphatase 2A regulatory subunit B.
      
 0.636
ENSPTIP00000006101
annotation not available
      
 0.623
PLA2G4D
Cytosolic phospholipase A2.
      
 0.617
MYBPC2
Myosin binding protein C, fast type.
    
 0.599
NDUFS2
NADH dehydrogenase (ubiquinone) Fe-S protein 2.
   
 
 0.551
TTC13
Tetratricopeptide repeat domain 13.
   
 
 0.535
NELFCD
Negative elongation factor complex member C/D.
      
 0.529
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.