STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF622Zinc finger protein 622. (476 aa)    
Predicted Functional Partners:
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.912
NMD3
Nonsense-mediated mRNA decay protein 3.
   
 
 0.905
PA2G4
Proliferation-associated 2G4.
   
 
 0.873
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.863
RPL24
Large subunit ribosomal protein L24e.
    
 
 0.769
RPL23A
Large subunit ribosomal protein L23Ae.
   
 
 0.766
RSL24D1
Large subunit ribosomal protein L24e.
   
 
 0.754
RPL7A
Ribosomal protein L7a.
   
 
 0.747
RPL19
Large subunit ribosomal protein L19e.
   
 
 0.734
RPL23
Large subunit ribosomal protein L23e.
    
 
 0.733
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.