STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMPK1Cytidine/uridine monophosphate kinase 1. (144 aa)    
Predicted Functional Partners:
ATP5F1C
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1.
   
 
 0.658
ATP5F1A
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle.
   
 
 0.631
ATP5PO
ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit.
   
 
 0.630
RPL23
Large subunit ribosomal protein L23e.
  
 
 0.621
RPS3
Small subunit ribosomal protein S3e.
  
  
 0.618
RPS18
Small subunit ribosomal protein S18e.
  
  
 0.615
RPS9
Small subunit ribosomal protein S9e.
  
  
 0.582
POLR1A
DNA-directed RNA polymerase I subunit RPA1.
  
  
 0.573
LOC102955246
Lysine-specific demethylase 6A-like.
  
 0.568
AK1
Adenylate kinase 1.
  
  
 
0.561
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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