CECR2 protein (Panthera tigris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CECR2

Cat eye syndrome chromosome region, candidate 2. (1464 aa)

Predicted Functional Partners:

MYSM1

0.972

TADA3

0.891

TAF9B

0.891

TAF10

0.884

SMARCA1

0.871

SMARCA5

0.835

SUPT3H

0.829

ENY2

0.824

TAF12

0.823

TADA2B

0.790

Your Current Organism:

Panthera tigris

NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CECR2	ENY2	ENSPTIP00000015315	ENSPTIP00000019524	Cat eye syndrome chromosome region, candidate 2.	ENY2, transcription and export complex 2 subunit.	0.824
CECR2	MYSM1	ENSPTIP00000015315	ENSPTIP00000013844	Cat eye syndrome chromosome region, candidate 2.	Myb like, SWIRM and MPN domains 1.	0.972
CECR2	SMARCA1	ENSPTIP00000015315	ENSPTIP00000000509	Cat eye syndrome chromosome region, candidate 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.	0.871
CECR2	SMARCA5	ENSPTIP00000015315	ENSPTIP00000025061	Cat eye syndrome chromosome region, candidate 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.835
CECR2	SUPT3H	ENSPTIP00000015315	ENSPTIP00000000876	Cat eye syndrome chromosome region, candidate 2.	SPT3 homolog, SAGA and STAGA complex component.	0.829
CECR2	TADA2B	ENSPTIP00000015315	ENSPTIP00000002023	Cat eye syndrome chromosome region, candidate 2.	Transcriptional adapter 2-beta.	0.790
CECR2	TADA3	ENSPTIP00000015315	ENSPTIP00000009018	Cat eye syndrome chromosome region, candidate 2.	Transcriptional adapter 3.	0.891
CECR2	TAF10	ENSPTIP00000015315	ENSPTIP00000014067	Cat eye syndrome chromosome region, candidate 2.	Transcription initiation factor TFIID subunit 10.	0.884
CECR2	TAF12	ENSPTIP00000015315	ENSPTIP00000017212	Cat eye syndrome chromosome region, candidate 2.	Transcription initiation factor TFIID subunit 12.	0.823
CECR2	TAF9B	ENSPTIP00000015315	ENSPTIP00000011570	Cat eye syndrome chromosome region, candidate 2.	Transcription initiation factor TFIID subunit 9B.	0.891
ENY2	CECR2	ENSPTIP00000019524	ENSPTIP00000015315	ENY2, transcription and export complex 2 subunit.	Cat eye syndrome chromosome region, candidate 2.	0.824
ENY2	SUPT3H	ENSPTIP00000019524	ENSPTIP00000000876	ENY2, transcription and export complex 2 subunit.	SPT3 homolog, SAGA and STAGA complex component.	0.908
ENY2	TADA2B	ENSPTIP00000019524	ENSPTIP00000002023	ENY2, transcription and export complex 2 subunit.	Transcriptional adapter 2-beta.	0.900
ENY2	TADA3	ENSPTIP00000019524	ENSPTIP00000009018	ENY2, transcription and export complex 2 subunit.	Transcriptional adapter 3.	0.921
ENY2	TAF10	ENSPTIP00000019524	ENSPTIP00000014067	ENY2, transcription and export complex 2 subunit.	Transcription initiation factor TFIID subunit 10.	0.927
ENY2	TAF12	ENSPTIP00000019524	ENSPTIP00000017212	ENY2, transcription and export complex 2 subunit.	Transcription initiation factor TFIID subunit 12.	0.922
ENY2	TAF9B	ENSPTIP00000019524	ENSPTIP00000011570	ENY2, transcription and export complex 2 subunit.	Transcription initiation factor TFIID subunit 9B.	0.912
MYSM1	CECR2	ENSPTIP00000013844	ENSPTIP00000015315	Myb like, SWIRM and MPN domains 1.	Cat eye syndrome chromosome region, candidate 2.	0.972
MYSM1	SMARCA1	ENSPTIP00000013844	ENSPTIP00000000509	Myb like, SWIRM and MPN domains 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.	0.565
MYSM1	SMARCA5	ENSPTIP00000013844	ENSPTIP00000025061	Myb like, SWIRM and MPN domains 1.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.571