STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SONSON DNA binding protein. (2333 aa)    
Predicted Functional Partners:
RBM39
RNA binding motif protein 39.
   
  0.899
PRRC2C
Proline rich coiled-coil 2C.
   
    0.870
RBM23
RNA binding motif protein 23.
   
  0.830
SETD2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
   
 0.810
PRPF4B
Serine/threonine-protein kinase PRP4.
   
  
0.788
DDX5
ATP-dependent RNA helicase DDX5/DBP2.
   
 0.786
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.757
RBM25
RNA binding motif protein 25.
   
 
 0.749
SRSF12
Serine and arginine rich splicing factor 12.
  
 0.723
UNC79
Unc-79 homolog (C. elegans).
    
 0.691
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.