STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM1Small G protein signaling modulator 1. (1145 aa)    
Predicted Functional Partners:
DPYSL4
Dihydropyrimidinase like 4.
      
 0.762
RAB9B
RAB9B, member RAS oncogene family.
    
 
 0.728
PIWIL3
Piwi-like protein 1.
      
 0.629
TCERG1L
Transcription elongation regulator 1 like.
      
 0.628
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
      
 0.613
MTCH2
Mitochondrial carrier 2.
      
 0.607
INPP5A
Inositol polyphosphate 5-phosphatase INPP5A.
      
 0.607
WSCD2
WSC domain containing 2.
      
 0.599
PLEKHG3
Pleckstrin homology and RhoGEF domain containing G3.
      
 0.579
RABGEF1
RAB guanine nucleotide exchange factor 1.
     
 0.547
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.