STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN1TatD DNase domain containing 1. (297 aa)    
Predicted Functional Partners:
EIF3E
Eukaryotic translation initiation factor 3 subunit E.
   
  
 0.800
TRIM66
Tripartite motif-containing protein 66.
      
 0.626
KLHL22
Kelch like family member 22.
      
 0.555
MRPL13
Large subunit ribosomal protein L13.
  
  
 0.538
RNF139
E3 ubiquitin-protein ligase RNF139.
      
 0.534
ZNF74
Zinc finger protein 74.
      
 0.518
MTSS1
MTSS I-BAR domain containing 1.
      
 0.517
CLDND1
Claudin domain containing 1.
      
 0.512
PFDN5
Prefoldin alpha subunit.
   
  
 0.497
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
   
  
 0.457
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.