STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCAGrancalcin. (217 aa)    
Predicted Functional Partners:
EFHC2
EF-hand domain containing 2.
      
 0.599
ALG2
ALG2, alpha-1,3/1,6-mannosyltransferase.
    
 
 0.532
MAP6
Microtubule associated protein 6.
      
 0.524
TXNDC8
Thioredoxin domain-containing protein 8.
    
 
 0.514
ENTPD6
Ectonucleoside triphosphate diphosphohydrolase 6 (putative).
      
 0.513
CAST
Calpastatin.
   
 0.511
ANXA7
Annexin A7.
   
 0.510
FECH
Protoporphyrin/coproporphyrin ferrochelatase.
   
    0.456
EFHD1
EF-hand domain family member D1.
      
 0.434
SLC23A2
Solute carrier family 23 (nucleobase transporter), member 2.
      
 0.434
Your Current Organism:
Panthera tigris
NCBI taxonomy Id: 74533
Other names: Amur tiger, P. tigris altaica, Panthera tigris altaica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.