STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG34307.1Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family. (369 aa)    
Predicted Functional Partners:
SCG34299.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
  0.906
SCG41820.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
    
 0.633
SCG34293.1
Mannosyltransferase.
       0.623
SCG53948.1
Carbohydrate binding domain (family 11).
    
 0.584
SCG64009.1
Fibronectin type III domain-containing protein.
     
 0.580
SCG52352.1
Endoglucanase.
    
 0.552
SCG68438.1
Cellulose binding domain-containing protein.
    
 0.552
SCG79389.1
Endoglucanase.
    
 0.552
SCG78249.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
    
  0.514
SCG34314.1
Cutinase.
       0.512
Your Current Organism:
Micromonospora humi
NCBI taxonomy Id: 745366
Other names: DSM 45647, JCM 15292, M. humi, Micromonospora humi Songsumanus et al. 2011, Micromonospora sp. P0402, PCU 315, PCU:315, strain P0402
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