STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG52165.1Protein of unknown function. (158 aa)    
Predicted Functional Partners:
SCG51008.1
Protein of unknown function.
  
     0.679
SCG50339.1
Hypothetical protein.
  
     0.675
SCG69081.1
Hypothetical protein.
  
     0.630
SCG46761.1
Hypothetical protein.
  
     0.621
SCG56352.1
Hypothetical protein.
  
     0.614
SCG56960.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.611
SCG66212.1
Hypothetical protein.
  
     0.596
SCG76013.1
Hypothetical protein.
  
     0.571
SCG79373.1
Glyoxalase-like domain-containing protein.
  
     0.563
SCG51750.1
Hypothetical protein.
  
     0.553
Your Current Organism:
Micromonospora humi
NCBI taxonomy Id: 745366
Other names: DSM 45647, JCM 15292, M. humi, Micromonospora humi Songsumanus et al. 2011, Micromonospora sp. P0402, PCU 315, PCU:315, strain P0402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.