Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCG60103.1Response regulator receiver domain-containing protein. (512 aa)    
Predicted Functional Partners:
SCG35020.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.996
SCG33952.1
PAS/PAC sensor hybrid histidine kinase.
 
0.996
SCG60034.1
Signal transduction histidine kinase.
  
 0.989
SCG60113.1
Signal transduction histidine kinase.
 
  0.984
SCG60121.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.976
SCG66027.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.976
SCG54713.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.973
SCG60140.1
rsbT co-antagonist protein RsbR.
 
  0.968
SCG48180.1
GAF domain-containing protein.
  
 0.960
SCG60134.1
rsbT antagonist protein RsbS.
 
  0.953
Your Current Organism:
Micromonospora humi
NCBI taxonomy Id: 745366
Other names: DSM 45647, JCM 15292, M. humi, Micromonospora humi Songsumanus et al. 2011, Micromonospora sp. P0402, PCU 315, PCU:315, strain P0402
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.