STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG63085.1PhoD-like phosphatase. (570 aa)    
Predicted Functional Partners:
SCG63076.1
Transcriptional regulator, MarR family.
       0.757
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.571
folE
GTP cyclohydrolase I.
    
 0.568
SCG63058.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.558
SCG75998.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
 0.555
SCG34381.1
6-pyruvoyl-tetrahydropterin synthase.
  
  
  0.544
SCG63069.1
Drug resistance transporter, EmrB/QacA subfamily.
       0.498
SCG75992.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
    
  0.479
SCG63052.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
       0.442
SCG70508.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Micromonospora humi
NCBI taxonomy Id: 745366
Other names: DSM 45647, JCM 15292, M. humi, Micromonospora humi Songsumanus et al. 2011, Micromonospora sp. P0402, PCU 315, PCU:315, strain P0402
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