STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCG74547.1Protein N-acetyltransferase, RimJ/RimL family. (189 aa)    
Predicted Functional Partners:
SCG74543.1
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing).
       0.791
SCG34481.1
Protein N-acetyltransferase, RimJ/RimL family.
  
   
 0.686
SCG73445.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.674
SCG70476.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.606
SCG48014.1
Glutamate synthase (NADH) large subunit.
   
 
  0.603
SCG78115.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.602
SCG34071.1
Lysine N6-hydroxylase.
  
 
 0.570
SCG74537.1
Cytochrome oxidase assembly protein ShyY1.
       0.570
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.496
SCG34066.1
Siderophore synthetase component.
  
 
 0.481
Your Current Organism:
Micromonospora humi
NCBI taxonomy Id: 745366
Other names: DSM 45647, JCM 15292, M. humi, Micromonospora humi Songsumanus et al. 2011, Micromonospora sp. P0402, PCU 315, PCU:315, strain P0402
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