STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA73295.1Polar amino acid transport system ATP-binding protein. (238 aa)    
Predicted Functional Partners:
SKA73290.1
Polar amino acid transport system permease protein.
 0.999
SKA87772.1
Cystine transport system permease protein.
 0.995
SKA87373.1
Putative lysine transport system permease protein.
 0.975
SKA83173.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.956
SKA73284.1
Polar amino acid transport system substrate-binding protein.
 0.950
SKA84692.1
Polar amino acid transport system permease protein.
 0.950
SKA83180.1
Polar amino acid transport system permease protein.
 0.939
SKA81313.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.903
SKA79325.1
ABC-type multidrug transport system, ATPase component.
 
  
 
0.902
SKA96896.1
ABC-type multidrug transport system, ATPase component.
 
  
 
0.901
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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