Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA75025.1 | SKA75029.1 | SAMN02745178_00342 | SAMN02745178_00343 | Permease of the drug/metabolite transporter (DMT) superfamily. | TatD DNase family protein. | 0.773 |
SKA75025.1 | SKA75034.1 | SAMN02745178_00342 | SAMN02745178_00344 | Permease of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein. | 0.510 |
SKA75025.1 | metG | SAMN02745178_00342 | SAMN02745178_00341 | Permease of the drug/metabolite transporter (DMT) superfamily. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.794 |
SKA75029.1 | SKA75025.1 | SAMN02745178_00343 | SAMN02745178_00342 | TatD DNase family protein. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.773 |
SKA75029.1 | SKA75034.1 | SAMN02745178_00343 | SAMN02745178_00344 | TatD DNase family protein. | Hypothetical protein. | 0.510 |
SKA75029.1 | SKA75521.1 | SAMN02745178_00343 | SAMN02745178_00444 | TatD DNase family protein. | 3D (Asp-Asp-Asp) domain-containing protein. | 0.505 |
SKA75029.1 | SKA88033.1 | SAMN02745178_00343 | SAMN02745178_01807 | TatD DNase family protein. | [acyl-carrier-protein] S-malonyltransferase. | 0.495 |
SKA75029.1 | SKA94819.1 | SAMN02745178_00343 | SAMN02745178_02543 | TatD DNase family protein. | Single-strand DNA-binding protein. | 0.477 |
SKA75029.1 | infB | SAMN02745178_00343 | SAMN02745178_01321 | TatD DNase family protein. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.476 |
SKA75029.1 | metG | SAMN02745178_00343 | SAMN02745178_00341 | TatD DNase family protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.971 |
SKA75029.1 | rsmA | SAMN02745178_00343 | SAMN02745178_00702 | TatD DNase family protein. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.783 |
SKA75029.1 | secF | SAMN02745178_00343 | SAMN02745178_00793 | TatD DNase family protein. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.568 |
SKA75029.1 | tsaD | SAMN02745178_00343 | SAMN02745178_00424 | TatD DNase family protein. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.477 |
SKA75034.1 | SKA75025.1 | SAMN02745178_00344 | SAMN02745178_00342 | Hypothetical protein. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.510 |
SKA75034.1 | SKA75029.1 | SAMN02745178_00344 | SAMN02745178_00343 | Hypothetical protein. | TatD DNase family protein. | 0.510 |
SKA75034.1 | metG | SAMN02745178_00344 | SAMN02745178_00341 | Hypothetical protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.507 |
SKA75521.1 | SKA75029.1 | SAMN02745178_00444 | SAMN02745178_00343 | 3D (Asp-Asp-Asp) domain-containing protein. | TatD DNase family protein. | 0.505 |
SKA75521.1 | rsmA | SAMN02745178_00444 | SAMN02745178_00702 | 3D (Asp-Asp-Asp) domain-containing protein. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.812 |
SKA88033.1 | SKA75029.1 | SAMN02745178_01807 | SAMN02745178_00343 | [acyl-carrier-protein] S-malonyltransferase. | TatD DNase family protein. | 0.495 |
SKA88033.1 | rsmA | SAMN02745178_01807 | SAMN02745178_00702 | [acyl-carrier-protein] S-malonyltransferase. | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.761 |
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