STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA75386.1Glycosyltransferase family 6. (276 aa)    
Predicted Functional Partners:
SKA92366.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.835
SKA75382.1
Lipopolysaccharide transport system ATP-binding protein.
     
 0.777
SKA75390.1
Hypothetical protein.
       0.776
SKA75377.1
Lipopolysaccharide transport system permease protein.
     
 0.749
SKA75373.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.732
SKA73002.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.711
SKA82980.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
  
 0.698
SKA87347.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.683
SKA93600.1
UDP-galactopyranose mutase.
  
  
 0.681
SKA74269.1
Fucose 4-O-acetylase.
 
    0.635
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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