STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA75488.1Glyoxylase, beta-lactamase superfamily II. (287 aa)    
Predicted Functional Partners:
SKA75484.1
Methyltransferase domain-containing protein.
 
    0.921
SKA75507.1
2-dehydropantoate 2-reductase.
 
     0.895
SKA80899.1
Glyoxylase, beta-lactamase superfamily II.
  
  
  0.828
SKA75494.1
L-2-amino-thiazoline-4-carboxylic acid hydrolase.
       0.773
SKA75498.1
Hypothetical protein.
       0.773
SKA75502.1
Hypothetical protein.
  
  
 0.755
SKA75505.1
O-Methyltransferase involved in polyketide biosynthesis.
       0.737
SKA75511.1
L-2-amino-thiazoline-4-carboxylic acid hydrolase.
       0.737
SKA75516.1
Hypothetical protein.
       0.711
SKA75471.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
     0.674
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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