Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKA75913.1 | SKA75928.1 | SAMN02745178_00501 | SAMN02745178_00503 | SH3 domain-containing protein. | Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase. | 0.486 |
| SKA75913.1 | SKA83067.1 | SAMN02745178_00501 | SAMN02745178_01269 | SH3 domain-containing protein. | IMP dehydrogenase. | 0.823 |
| SKA75913.1 | cinA | SAMN02745178_00501 | SAMN02745178_00483 | SH3 domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.841 |
| SKA75913.1 | guaA | SAMN02745178_00501 | SAMN02745178_02092 | SH3 domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.852 |
| SKA75913.1 | mfd | SAMN02745178_00501 | SAMN02745178_00500 | SH3 domain-containing protein. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.517 |
| SKA75913.1 | pth | SAMN02745178_00501 | SAMN02745178_00502 | SH3 domain-containing protein. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.759 |
| SKA75928.1 | SKA75913.1 | SAMN02745178_00503 | SAMN02745178_00501 | Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase. | SH3 domain-containing protein. | 0.486 |
| SKA75928.1 | mfd | SAMN02745178_00503 | SAMN02745178_00500 | Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.444 |
| SKA75928.1 | pth | SAMN02745178_00503 | SAMN02745178_00502 | Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.567 |
| SKA83067.1 | SKA75913.1 | SAMN02745178_01269 | SAMN02745178_00501 | IMP dehydrogenase. | SH3 domain-containing protein. | 0.823 |
| SKA83067.1 | guaA | SAMN02745178_01269 | SAMN02745178_02092 | IMP dehydrogenase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.999 |
| cinA | SKA75913.1 | SAMN02745178_00483 | SAMN02745178_00501 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | SH3 domain-containing protein. | 0.841 |
| guaA | SKA75913.1 | SAMN02745178_02092 | SAMN02745178_00501 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | SH3 domain-containing protein. | 0.852 |
| guaA | SKA83067.1 | SAMN02745178_02092 | SAMN02745178_01269 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | IMP dehydrogenase. | 0.999 |
| guaA | pth | SAMN02745178_02092 | SAMN02745178_00502 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.684 |
| mfd | SKA75913.1 | SAMN02745178_00500 | SAMN02745178_00501 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | SH3 domain-containing protein. | 0.517 |
| mfd | SKA75928.1 | SAMN02745178_00500 | SAMN02745178_00503 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase. | 0.444 |
| mfd | pth | SAMN02745178_00500 | SAMN02745178_00502 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.838 |
| pth | SKA75913.1 | SAMN02745178_00502 | SAMN02745178_00501 | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | SH3 domain-containing protein. | 0.759 |
| pth | SKA75928.1 | SAMN02745178_00502 | SAMN02745178_00503 | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase. | 0.567 |
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