Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA76390.1 | SKA76395.1 | SAMN02745178_00583 | SAMN02745178_00584 | Uncharacterized protein, UPF0297 family. | Oligoendopeptidase, M3 family. | 0.512 |
SKA76390.1 | SKA76400.1 | SAMN02745178_00583 | SAMN02745178_00585 | Uncharacterized protein, UPF0297 family. | Hypothetical protein. | 0.512 |
SKA76395.1 | SKA76390.1 | SAMN02745178_00584 | SAMN02745178_00583 | Oligoendopeptidase, M3 family. | Uncharacterized protein, UPF0297 family. | 0.512 |
SKA76395.1 | SKA76400.1 | SAMN02745178_00584 | SAMN02745178_00585 | Oligoendopeptidase, M3 family. | Hypothetical protein. | 0.773 |
SKA76395.1 | SKA76404.1 | SAMN02745178_00584 | SAMN02745178_00586 | Oligoendopeptidase, M3 family. | Peptide/nickel transport system substrate-binding protein. | 0.401 |
SKA76395.1 | SKA82713.1 | SAMN02745178_00584 | SAMN02745178_01199 | Oligoendopeptidase, M3 family. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.452 |
SKA76400.1 | SKA76390.1 | SAMN02745178_00585 | SAMN02745178_00583 | Hypothetical protein. | Uncharacterized protein, UPF0297 family. | 0.512 |
SKA76400.1 | SKA76395.1 | SAMN02745178_00585 | SAMN02745178_00584 | Hypothetical protein. | Oligoendopeptidase, M3 family. | 0.773 |
SKA76404.1 | SKA76395.1 | SAMN02745178_00586 | SAMN02745178_00584 | Peptide/nickel transport system substrate-binding protein. | Oligoendopeptidase, M3 family. | 0.401 |
SKA82713.1 | SKA76395.1 | SAMN02745178_01199 | SAMN02745178_00584 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Oligoendopeptidase, M3 family. | 0.452 |