Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKA78691.1 | SKA78704.1 | SAMN02745178_00817 | SAMN02745178_00819 | N6-L-threonylcarbamoyladenine synthase. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.786 |
| SKA78691.1 | SKA78709.1 | SAMN02745178_00817 | SAMN02745178_00820 | N6-L-threonylcarbamoyladenine synthase. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.803 |
| SKA78691.1 | SKA78715.1 | SAMN02745178_00817 | SAMN02745178_00821 | N6-L-threonylcarbamoyladenine synthase. | Hypothetical protein. | 0.778 |
| SKA78691.1 | SKA78722.1 | SAMN02745178_00817 | SAMN02745178_00823 | N6-L-threonylcarbamoyladenine synthase. | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | 0.744 |
| SKA78691.1 | argR | SAMN02745178_00817 | SAMN02745178_00825 | N6-L-threonylcarbamoyladenine synthase. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.705 |
| SKA78691.1 | dxs | SAMN02745178_00817 | SAMN02745178_00822 | N6-L-threonylcarbamoyladenine synthase. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.768 |
| SKA78691.1 | nadK | SAMN02745178_00817 | SAMN02745178_00824 | N6-L-threonylcarbamoyladenine synthase. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.705 |
| SKA78691.1 | nusB | SAMN02745178_00817 | SAMN02745178_00816 | N6-L-threonylcarbamoyladenine synthase. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.800 |
| SKA78691.1 | xseA | SAMN02745178_00817 | SAMN02745178_00818 | N6-L-threonylcarbamoyladenine synthase. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.800 |
| SKA78704.1 | SKA78691.1 | SAMN02745178_00819 | SAMN02745178_00817 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | N6-L-threonylcarbamoyladenine synthase. | 0.786 |
| SKA78704.1 | SKA78709.1 | SAMN02745178_00819 | SAMN02745178_00820 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.921 |
| SKA78704.1 | SKA78715.1 | SAMN02745178_00819 | SAMN02745178_00821 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | Hypothetical protein. | 0.760 |
| SKA78704.1 | SKA78722.1 | SAMN02745178_00819 | SAMN02745178_00823 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | 0.736 |
| SKA78704.1 | argR | SAMN02745178_00819 | SAMN02745178_00825 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.681 |
| SKA78704.1 | dxs | SAMN02745178_00819 | SAMN02745178_00822 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.763 |
| SKA78704.1 | nadK | SAMN02745178_00819 | SAMN02745178_00824 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.681 |
| SKA78704.1 | nusB | SAMN02745178_00819 | SAMN02745178_00816 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.827 |
| SKA78704.1 | xseA | SAMN02745178_00819 | SAMN02745178_00818 | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.998 |
| SKA78709.1 | SKA78691.1 | SAMN02745178_00820 | SAMN02745178_00817 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | N6-L-threonylcarbamoyladenine synthase. | 0.803 |
| SKA78709.1 | SKA78704.1 | SAMN02745178_00820 | SAMN02745178_00819 | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.921 |
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