Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA73934.1 | SKA80143.1 | SAMN02745178_00234 | SAMN02745178_00954 | Serine protease Do. | Hypothetical protein. | 0.598 |
SKA80143.1 | SKA73934.1 | SAMN02745178_00954 | SAMN02745178_00234 | Hypothetical protein. | Serine protease Do. | 0.598 |
SKA80143.1 | SKA80147.1 | SAMN02745178_00954 | SAMN02745178_00955 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.938 |
SKA80143.1 | SKA93361.1 | SAMN02745178_00954 | SAMN02745178_02368 | Hypothetical protein. | Uncharacterized protein YxjI. | 0.599 |
SKA80143.1 | SKA95050.1 | SAMN02745178_00954 | SAMN02745178_02573 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.424 |
SKA80143.1 | pheT | SAMN02745178_00954 | SAMN02745178_00692 | Hypothetical protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.502 |
SKA80147.1 | SKA80143.1 | SAMN02745178_00955 | SAMN02745178_00954 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.938 |
SKA80147.1 | SKA93361.1 | SAMN02745178_00955 | SAMN02745178_02368 | DNA-binding transcriptional regulator, MarR family. | Uncharacterized protein YxjI. | 0.556 |
SKA93361.1 | SKA80143.1 | SAMN02745178_02368 | SAMN02745178_00954 | Uncharacterized protein YxjI. | Hypothetical protein. | 0.599 |
SKA93361.1 | SKA80147.1 | SAMN02745178_02368 | SAMN02745178_00955 | Uncharacterized protein YxjI. | DNA-binding transcriptional regulator, MarR family. | 0.556 |
SKA95050.1 | SKA80143.1 | SAMN02745178_02573 | SAMN02745178_00954 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.424 |
pheT | SKA80143.1 | SAMN02745178_00692 | SAMN02745178_00954 | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Hypothetical protein. | 0.502 |