STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA80538.1Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (433 aa)    
Predicted Functional Partners:
SKA98459.1
Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
 
     0.973
SKA96564.1
PTS system, D-glucosamine-specific IIC component.
  
 
 0.922
SKA92742.1
PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family.
  
 
 0.740
SKA96827.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.740
SKA77709.1
Mannose-1-phosphate guanylyltransferase.
    
  0.731
SKA91937.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.689
SKA91930.1
PTS system, cellobiose-specific IIB component.
  
 
 0.676
SKA91942.1
PTS system, cellobiose-specific IIA component.
  
 
 0.673
SKA89870.1
Mannose-6-phosphate isomerase, type 1.
 
 
 0.657
SKA75529.1
Ribose 5-phosphate isomerase B.
  
 
 0.651
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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