STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA81011.1Cysteine synthase A. (297 aa)    
Predicted Functional Partners:
SKA73475.1
Serine O-acetyltransferase.
 
 0.970
SKA78178.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
  
 
 0.849
SKA74109.1
Threonine dehydratase.
 
 
 0.848
SKA94758.1
Glutamate synthase (ferredoxin).
     
 0.650
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.632
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.572
SKA81000.1
WG containing repeat-containing protein.
       0.542
SKA80991.1
WG containing repeat-containing protein.
       0.513
SKA75351.1
WxcM-like, C-terminal.
    
 0.493
SKA78273.1
ATP-grasp domain-containing protein.
  
 0.476
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.