STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA82451.1Phage DNA replication protein (predicted replicative helicase loader). (279 aa)    
Predicted Functional Partners:
SKA82468.1
Replication initiator protein A (RepA) N-terminus.
    0.934
SKA82485.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.885
SKA82493.1
Mobilisation protein (MobC).
 
     0.859
SKA82445.1
Transposon-encoded protein TnpW.
 
     0.782
SKA83974.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.743
SKA89100.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.743
SKA90458.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
     0.743
SKA83964.1
Replication initiator protein A (RepA) N-terminus.
 
    0.720
SKA89090.1
Replication initiator protein A (RepA) N-terminus.
 
    0.720
SKA90472.1
Replication initiator protein A (RepA) N-terminus.
 
    0.720
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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