STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA82546.1Protein of unknown function. (156 aa)    
Predicted Functional Partners:
SKA82538.1
Type IV secretion system protein VirD4.
 
     0.943
SKA82533.1
Maff2 family protein.
 
     0.899
SKA82551.1
Hypothetical protein.
 
     0.881
SKA90597.1
Hypothetical protein.
  
     0.773
SKA90636.1
Protein of unknown function.
  
     0.771
SKA95349.1
Hypothetical protein.
  
     0.766
SKA90767.1
Mobilisation protein (MobC).
  
     0.752
SKA94275.1
Hypothetical protein.
  
     0.750
SKA94627.1
Hypothetical protein.
  
     0.749
SKA90629.1
Protein of unknown function.
  
     0.742
Your Current Organism:
Gemmiger formicilis
NCBI taxonomy Id: 745368
Other names: ATCC 27749, G. formicilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.