Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA83432.1 | SKA83438.1 | SAMN02745178_01326 | SAMN02745178_01327 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Aminopeptidase. | 0.773 |
SKA83432.1 | murC | SAMN02745178_01326 | SAMN02745178_01328 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.416 |
SKA83432.1 | rimP | SAMN02745178_01326 | SAMN02745178_01325 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.486 |
SKA83438.1 | SKA83432.1 | SAMN02745178_01327 | SAMN02745178_01326 | Aminopeptidase. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.773 |
SKA83438.1 | SKA88926.1 | SAMN02745178_01327 | SAMN02745178_01895 | Aminopeptidase. | Serine aminopeptidase, S33. | 0.400 |
SKA83438.1 | murC | SAMN02745178_01327 | SAMN02745178_01328 | Aminopeptidase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.416 |
SKA83438.1 | rimP | SAMN02745178_01327 | SAMN02745178_01325 | Aminopeptidase. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.486 |
SKA88926.1 | SKA83438.1 | SAMN02745178_01895 | SAMN02745178_01327 | Serine aminopeptidase, S33. | Aminopeptidase. | 0.400 |
murC | SKA83432.1 | SAMN02745178_01328 | SAMN02745178_01326 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.416 |
murC | SKA83438.1 | SAMN02745178_01328 | SAMN02745178_01327 | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | Aminopeptidase. | 0.416 |
rimP | SKA83432.1 | SAMN02745178_01325 | SAMN02745178_01326 | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.486 |
rimP | SKA83438.1 | SAMN02745178_01325 | SAMN02745178_01327 | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Aminopeptidase. | 0.486 |