Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKA75138.1 | SKA84413.1 | SAMN02745178_00363 | SAMN02745178_01410 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Hypothetical protein. | 0.779 |
SKA84405.1 | SKA84413.1 | SAMN02745178_01409 | SAMN02745178_01410 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | Hypothetical protein. | 0.785 |
SKA84405.1 | argR | SAMN02745178_01409 | SAMN02745178_00825 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.411 |
SKA84405.1 | rsmI | SAMN02745178_01409 | SAMN02745178_01411 | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.520 |
SKA84413.1 | SKA75138.1 | SAMN02745178_01410 | SAMN02745178_00363 | Hypothetical protein. | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.779 |
SKA84413.1 | SKA84405.1 | SAMN02745178_01410 | SAMN02745178_01409 | Hypothetical protein. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.785 |
SKA84413.1 | argR | SAMN02745178_01410 | SAMN02745178_00825 | Hypothetical protein. | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | 0.418 |
SKA84413.1 | rsmI | SAMN02745178_01410 | SAMN02745178_01411 | Hypothetical protein. | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.489 |
argR | SKA84405.1 | SAMN02745178_00825 | SAMN02745178_01409 | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.411 |
argR | SKA84413.1 | SAMN02745178_00825 | SAMN02745178_01410 | Transcriptional regulator, ArgR family; Regulates arginine biosynthesis genes. | Hypothetical protein. | 0.418 |
rsmI | SKA84405.1 | SAMN02745178_01411 | SAMN02745178_01409 | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.520 |
rsmI | SKA84413.1 | SAMN02745178_01411 | SAMN02745178_01410 | 16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Hypothetical protein. | 0.489 |